Amino sugar and nucleotide sugar metabolism
| Source | ID | Pathway |
|---|---|---|
| PathWhiz | PW002413 | |
| KEGG | 00520 |  |
Pathway Metabolites
| YMDB ID | Name CAS Number | IUPAC Name | Formula Weight | Structure |
|---|---|---|---|---|
| YMDB00002 | L-Glutamine 56-85-9 | (2S)-2-amino-4-carbamoylbutanoic acid | C5H10N2O3 146.1445 |  |
| YMDB00004 | Galactose 1-phosphate 2255-14-3 | {[(2R,3R,4S,5R,6R)-3,4,5-trihydroxy-6-(hydroxymethyl)oxan-2-yl]oxy}phosphonic acid | C6H13O9P 260.1358 |  |
| YMDB00043 | N-Acetyl-glucosamine 1-phosphate 901851-43-2 | {[(3R,4R,5S,6R)-3-acetamido-4,5-dihydroxy-6-(hydroxymethyl)oxan-2-yl]oxy}phosphonic acid | C8H16NO9P 301.1877 |  |
| YMDB00044 | Glucosamine 6-phosphate 3616-42-0 | {[(2R,3S,4R,5R,6S)-5-amino-3,4,6-trihydroxyoxan-2-yl]methoxy}phosphonic acid | C6H14NO8P 259.151 |  |
| YMDB00045 | Coenzyme A 85-61-0 | {[(2R,3S,4R,5R)-5-(6-amino-9H-purin-9-yl)-4-hydroxy-2-({[hydroxy({hydroxy[(3R)-3-hydroxy-2,2-dimethyl-3-({2-[(2-sulfanylethyl)carbamoyl]ethyl}carbamoyl)propoxy]phosphoryl}oxy)phosphoryl]oxy}methyl)oxolan-3-yl]oxy}phosphonic acid | C21H36N7O16P3S 767.534 |  |
| YMDB00072 | D-Galactose 59-23-4 | (2S,3R,4S,5R,6R)-6-(hydroxymethyl)oxane-2,3,4,5-tetrol | C6H12O6 180.1559 |  |
| YMDB00078 | Fructose 6-phosphate 643-13-0 | {[(2R,3R,4S)-2,3,4,6-tetrahydroxy-5-oxohexyl]oxy}phosphonic acid | C6H13O9P 260.1358 |  |
| YMDB00109 | Adenosine triphosphate 56-65-5 | ({[({[(2R,3S,4R,5R)-5-(6-amino-9H-purin-9-yl)-3,4-dihydroxyoxolan-2-yl]methoxy}(hydroxy)phosphoryl)oxy](hydroxy)phosphoryl}oxy)phosphonic acid | C10H16N5O13P3 507.181 |  |
| YMDB00146 | Beta-D-Glucose 492-61-5 | (2R,3R,4S,5S,6R)-6-(hydroxymethyl)oxane-2,3,4,5-tetrol | C6H12O6 180.1559 |  |
| YMDB00202 | Guanosine diphosphate mannose 3123-67-9 | [({[(2R,3S,4R,5R)-5-(2-amino-6-oxo-6,9-dihydro-1H-purin-9-yl)-3,4-dihydroxyoxolan-2-yl]methoxy}(hydroxy)phosphoryl)oxy]({[(2R,3S,4S,5S,6R)-3,4,5-trihydroxy-6-(hydroxymethyl)oxan-2-yl]oxy})phosphinic acid | C16H25N5O16P2 605.3411 |  |
| YMDB00212 | Uridine diphosphate glucose 133-89-1 | [({[(2R,3S,4R,5R)-5-(2,4-dioxo-1,2,3,4-tetrahydropyrimidin-1-yl)-3,4-dihydroxyoxolan-2-yl]methoxy}(hydroxy)phosphoryl)oxy]({[(2R,3R,4S,5S,6R)-3,4,5-trihydroxy-6-(hydroxymethyl)oxan-2-yl]oxy})phosphinic acid | C15H24N2O17P2 566.3018 |  |
| YMDB00219 | Pyrophosphate 14000-31-8 | (phosphonooxy)phosphonic acid | H4O7P2 177.9751 |  |
| YMDB00242 | Mannose 6-phosphate 3672-15-9 | {[(2R,3S,4S,5S,6R)-3,4,5,6-tetrahydroxyoxan-2-yl]methoxy}phosphonic acid | C6H13O9P 260.1358 |  |
| YMDB00271 | L-Glutamic acid 56-86-0 | (2S)-2-aminopentanedioic acid | C5H9NO4 147.1293 |  |
| YMDB00273 | Alpha-D-Glucose 492-62-6 | (2S,3R,4S,5S,6R)-6-(hydroxymethyl)oxane-2,3,4,5-tetrol | C6H12O6 180.1559 |  |
| YMDB00277 | Uridine diphosphate-N-acetylglucosamine 528-04-1 | [({[(2R,3S,4R,5R)-5-(2,4-dioxo-1,2,3,4-tetrahydropyrimidin-1-yl)-3,4-dihydroxyoxolan-2-yl]methoxy}(hydroxy)phosphoryl)oxy]({[(2R,3R,4R,5S,6R)-3-acetamido-4,5-dihydroxy-6-(hydroxymethyl)oxan-2-yl]oxy})phosphinic acid | C17H27N3O17P2 607.3537 |  |
| YMDB00286 | D-Glucose 50-99-7 | (3R,4S,5S,6R)-6-(hydroxymethyl)oxane-2,3,4,5-tetrol | C6H12O6 180.1559 |  |
| YMDB00288 | Glucose 1-phosphate 59-56-3 | {[(3R,4S,5S,6R)-3,4,5-trihydroxy-6-(hydroxymethyl)oxan-2-yl]oxy}phosphonic acid | C6H13O9P 260.1358 |  |
| YMDB00294 | 2-deoxy-D-glucose 7512-17-6 | (3R,4S,5R)-3,4,5,6-tetrahydroxyhexanal | C6H12O5 164.1565 |  |
| YMDB00307 | Uridine 5'-diphosphate 58-98-0 | [({[(2R,3S,4R,5R)-5-(2,4-dioxo-1,2,3,4-tetrahydropyrimidin-1-yl)-3,4-dihydroxyoxolan-2-yl]methoxy}(hydroxy)phosphoryl)oxy]phosphonic acid | C9H14N2O12P2 404.1612 |  |
| YMDB00311 | Beta-D-Glucose 6-phosphate | {[(2R,3S,4S,5R,6R)-3,4,5,6-tetrahydroxyoxan-2-yl]methoxy}phosphonic acid | C6H13O9P 260.1358 |  |
| YMDB00312 | Acetyl-CoA 72-89-9 | {[(2R,3S,4R,5R)-2-({[({[(3R)-3-[(2-{[2-(acetylsulfanyl)ethyl]carbamoyl}ethyl)carbamoyl]-3-hydroxy-2,2-dimethylpropoxy](hydroxy)phosphoryl}oxy)(hydroxy)phosphoryl]oxy}methyl)-5-(6-amino-9H-purin-9-yl)-4-hydroxyoxolan-3-yl]oxy}phosphonic acid | C23H38N7O17P3S 809.571 |  |
| YMDB00326 | Uridine triphosphate 63-39-8 | ({[({[(2R,3S,4R,5R)-5-(2,4-dioxo-1,2,3,4-tetrahydropyrimidin-1-yl)-3,4-dihydroxyoxolan-2-yl]methoxy}(hydroxy)phosphoryl)oxy](hydroxy)phosphoryl}oxy)phosphonic acid | C9H15N2O15P3 484.1411 |  |
| YMDB00386 | D-Mannose 1-phosphate 27251-84-9 | {[(3S,4S,5S,6R)-3,4,5-trihydroxy-6-(hydroxymethyl)oxan-2-yl]oxy}phosphonic acid | C6H13O9P 260.1358 |  |
| YMDB00415 | UDP-D-glucose 133-89-1 | [({[(2R,3S,4R,5R)-5-(2,4-dioxo-1,2,3,4-tetrahydropyrimidin-1-yl)-3,4-dihydroxyoxolan-2-yl]methoxy}(hydroxy)phosphoryl)oxy]({[(3R,4S,5S,6R)-3,4,5-trihydroxy-6-(hydroxymethyl)oxan-2-yl]oxy})phosphinic acid | C15H24N2O17P2 566.3018 |  |
| YMDB00558 | GTP 86-01-1 | ({[({[(2R,3S,4R,5R)-5-(2-amino-6-oxo-6,9-dihydro-1H-purin-9-yl)-3,4-dihydroxyoxolan-2-yl]methoxy}(hydroxy)phosphoryl)oxy](hydroxy)phosphoryl}oxy)phosphonic acid | C10H16N5O14P3 523.1804 |  |
| YMDB00657 | D-Fructose 57-48-7 | (3S,4R,5R)-1,3,4,5,6-pentahydroxyhexan-2-one | C6H12O6 180.1559 |  |
| YMDB00674 | aldehydo-D-galacturonate 685-73-4 | (2S,3R,4S,5R)-2,3,4,5-tetrahydroxy-6-oxohexanoic acid | C6H10O7 194.1394 |  |
| YMDB00692 | UDP-D-galactose 2956-16-3 | [({[(2R,3S,4R,5R)-5-(2,4-dioxo-1,2,3,4-tetrahydropyrimidin-1-yl)-3,4-dihydroxyoxolan-2-yl]methoxy}(hydroxy)phosphoryl)oxy]({[(3R,4S,5R,6R)-3,4,5-trihydroxy-6-(hydroxymethyl)oxan-2-yl]oxy})phosphinic acid | C15H24N2O17P2 566.3018 |  |
| YMDB00737 | N-acetyl-D-glucosamine 6-phosphate 102029-88-9 | {[(2R,3S,4R,5R)-5-acetamido-3,4,6-trihydroxyoxan-2-yl]methoxy}phosphonic acid | C8H16NO9P 301.1877 |  |
| YMDB00751 | N-acetyl-alpha-D-glucosamine 1-phosphate | {[(2R,3R,4R,5S,6R)-3-acetamido-4,5-dihydroxy-6-(hydroxymethyl)oxan-2-yl]oxy}phosphonic acid | C8H16NO9P 301.1877 |  |
| YMDB00754 | alpha-D-glucosamine 1-phosphate | {[(2R,3R,4R,5S,6R)-3-amino-4,5-dihydroxy-6-(hydroxymethyl)oxan-2-yl]oxy}phosphonic acid | C6H14NO8P 259.151 |  |
| YMDB00779 | aldehydo-D-Xylose 58-86-6 | (3R,4S,5R)-oxane-2,3,4,5-tetrol | C5H10O5 150.1299 |  |
| YMDB00789 | Galactose 2956-16-3 | (2R,3S,4S,5R)-2,3,4,5,6-pentahydroxyhexanal | C6H12O6 180.1559 |  |
| YMDB00797 | udp-galactose 2956-16-3 | [({[(2R,3S,4R,5S)-5-(2,6-dioxo-1,2,3,6-tetrahydropyrimidin-4-yl)-3,4-dihydroxyoxolan-2-yl]methoxy}(hydroxy)phosphoryl)oxy]({[(2S,3R,4S,5R,6R)-3,4,5-trihydroxy-6-(hydroxymethyl)oxan-2-yl]oxy})phosphinic acid | C15H24N2O17P2 566.3018 |  |
| YMDB00831 | alpha-D-mannose 1-phosphate 27251-84-9 | {[(2R,3S,4S,5S,6R)-3,4,5-trihydroxy-6-(hydroxymethyl)oxan-2-yl]oxy}phosphonic acid | C6H13O9P 260.1358 |  |
| YMDB00846 | Alpha-D-Mannose 3458-28-4 | (2S,3S,4S,5S,6R)-6-(hydroxymethyl)oxane-2,3,4,5-tetrol | C6H12O6 180.1559 |  |
| YMDB00862 | hydron 12408-02-5 | hydron | H 1.00794 |  |
| YMDB00893 | L-Arabinose 5328-37-0 | (3R,4S,5S)-oxane-2,3,4,5-tetrol | C5H10O5 150.1299 |  |
| YMDB00894 | D-Mannose 3458-28-4 | (3S,4S,5S,6R)-6-(hydroxymethyl)oxane-2,3,4,5-tetrol | C6H12O6 180.1559 |  |
| YMDB00904 | Pectin 9000-69-5 | (2S,3R,4S,5R,6R)-3,4,5,6-tetrahydroxyoxane-2-carboxylic acid | C6H10O7 194.1394 |  |
| YMDB00914 | ADP 58-64-0 | [({[(2R,3S,4R,5R)-5-(6-amino-9H-purin-9-yl)-3,4-dihydroxyoxolan-2-yl]methoxy}(hydroxy)phosphoryl)oxy]phosphonic acid | C10H15N5O10P2 427.2011 |  |
| YMDB00947 | Glucose 6-phosphate 56-73-5 | {[(2R,3S,4S,5R)-3,4,5,6-tetrahydroxyoxan-2-yl]methoxy}phosphonic acid | C6H13O9P 260.1358 |  |
| YMDB00966 | D-mannose 6-phosphate 3672-15-9 | {[(2R,3S,4S,5S)-3,4,5,6-tetrahydroxyoxan-2-yl]methoxy}phosphonic acid | C6H13O9P 260.1358 |  |
| YMDB00970 | alpha-D-glucose 1-phosphate 59-56-3 | {[(2R,3R,4S,5S,6R)-3,4,5-trihydroxy-6-(hydroxymethyl)oxan-2-yl]oxy}phosphonic acid | C6H13O9P 260.1358 |  |
| YMDB16156 | Chitin | C28H49N3O16 683.6992 |  | |
| YMDB16176 | Beta-D-Fructose 6-phosphate | {[(2R,3S,4S,5R)-3,4,5-trihydroxy-5-(hydroxymethyl)oxolan-2-yl]methoxy}phosphonic acid | C6H13O9P 260.1358 |  |
Pathway Proteins
| Uniprot ID | Gene Name Locus | Name | Type | Metabolites |
|---|---|---|---|---|
| A2P2R3 | YMR084W | Putative glucosamine--fructose-6-phosphate aminotransferase [isomerizing] | Enzyme | |
| P14742 | GFA1 YKL104C | Glucosamine--fructose-6-phosphate aminotransferase [isomerizing] | Enzyme | |
| P04385 | GAL1 YBR020W | Galactokinase | Enzyme | |
| P08431 | GAL7 YBR018C | Galactose-1-phosphate uridylyltransferase | Enzyme | |
| P43123 | QRI1 YDL103C | UDP-N-acetylglucosamine pyrophosphorylase | Enzyme | |
| P38628 | PCM1 YEL058W | Phosphoacetylglucosamine mutase | Enzyme | |
| P43577 | GNA1 YFL017C | Glucosamine 6-phosphate N-acetyltransferase | Enzyme | |
| Q06702 | CDA1 YLR307W | Chitin deacetylase 1 | Enzyme | |
| Q06703 | CDA2 YLR308W | Chitin deacetylase 2 | Enzyme | |
| P37012 | PGM2 YMR105C | Phosphoglucomutase-2 | Enzyme | |
| P33401 | PGM1 YKL127W | Phosphoglucomutase-1 | Enzyme | |
| P04807 | HXK2 YGL253W | Hexokinase-2 | Enzyme | |
| Q06204 | YLR446W | Putative hexokinase YLR446W | Enzyme | |
| P04806 | HXK1 YFR053C | Hexokinase-1 | Enzyme | |
| P29952 | PMI40 YER003C | Mannose-6-phosphate isomerase | Enzyme | |
| P12709 | PGI1 YBR196C | Glucose-6-phosphate isomerase | Enzyme | |
| Q04409 | EMI2 YDR516C | Putative glucokinase-2 | Enzyme | |
| P17709 | GLK1 YCL040W | Glucokinase-1 | Enzyme | |
| P36060 | MCR1 YKL150W | NADH-cytochrome b5 reductase 2 | Enzyme | |
| P04397 | GAL10 YBR019C | Bifunctional protein GAL10 | Enzyme | |
| P41940 | MPG1 YDL055C | Mannose-1-phosphate guanyltransferase | Enzyme | |
| P38709 | YHL012W | Probable UTP--glucose-1-phosphate uridylyltransferase | Enzyme | |
| P32861 | UGP1 YKL035W | UTP--glucose-1-phosphate uridylyltransferase | Enzyme | |
| P07283 | SEC53 YFL045C | Phosphomannomutase | Enzyme | |
| Q03262 | YMR278W | Phosphoglucomutase YMR278W | Enzyme | |
| P14180 | CHS2 YBR038W | Chitin synthase 2 | Enzyme | |
| P29465 | CHS3 YBR023C | Chitin synthase 3 | Enzyme | |
| P08004 | CHS1 YNL192W | Chitin synthase 1 | Enzyme | |
| P38626 | CBR1 | NADH-cytochrome b5 reductase 1 | Enzyme |