Pyruvate metabolism
Source | ID | Pathway |
---|---|---|
PathWhiz | PW002447 | |
KEGG | 00620 | ![]() |
Pathway Metabolites
YMDB ID | Name CAS Number | IUPAC Name | Formula Weight | Structure |
---|---|---|---|---|
YMDB00022 | Acetaldehyde 75-07-0 | acetaldehyde | C2H4O 44.0526 | ![]() |
YMDB00033 | Glyoxylic acid 298-12-4 | 2-oxoacetic acid | C2H2O3 74.0355 | ![]() |
YMDB00045 | Coenzyme A 85-61-0 | {[(2R,3S,4R,5R)-5-(6-amino-9H-purin-9-yl)-4-hydroxy-2-({[hydroxy({hydroxy[(3R)-3-hydroxy-2,2-dimethyl-3-({2-[(2-sulfanylethyl)carbamoyl]ethyl}carbamoyl)propoxy]phosphoryl}oxy)phosphoryl]oxy}methyl)oxolan-3-yl]oxy}phosphonic acid | C21H36N7O16P3S 767.534 | ![]() |
YMDB00056 | Acetic acid 64-19-7 | acetic acid | C2H4O2 60.052 | ![]() |
YMDB00057 | Oxidized glutathione 27025-41-8 | 2-amino-4-[(2-{[2-(4-amino-4-carboxybutanamido)-2-[(carboxymethyl)carbamoyl]ethyl]disulfanyl}-1-[(carboxymethyl)carbamoyl]ethyl)carbamoyl]butanoic acid | C20H32N6O12S2 612.631 | ![]() |
YMDB00096 | (2R)-Homocitric acid 3562-74-1 | (2R)-2-hydroxybutane-1,2,4-tricarboxylic acid | C7H10O7 206.1501 | ![]() |
YMDB00097 | Adenosine monophosphate 61-19-8 | {[(2R,3S,4R,5R)-5-(6-amino-9H-purin-9-yl)-3,4-dihydroxyoxolan-2-yl]methoxy}phosphonic acid | C10H14N5O7P 347.2212 | ![]() |
YMDB00106 | 2-Isopropylmalic acid 49601-06-1 | (2S)-2-hydroxy-2-(propan-2-yl)butanedioic acid | C7H12O5 176.1672 | ![]() |
YMDB00109 | Adenosine triphosphate 56-65-5 | ({[({[(2R,3S,4R,5R)-5-(6-amino-9H-purin-9-yl)-3,4-dihydroxyoxolan-2-yl]methoxy}(hydroxy)phosphoryl)oxy](hydroxy)phosphoryl}oxy)phosphonic acid | C10H16N5O13P3 507.181 | ![]() |
YMDB00110 | NAD 53-84-9 | 1-[(2R,3R,4S,5R)-5-[({[({[(2R,3S,4R,5R)-5-(6-amino-9H-purin-9-yl)-3,4-dihydroxyoxolan-2-yl]methoxy}(hydroxy)phosphoryl)oxy](hydroxy)phosphoryl}oxy)methyl]-3,4-dihydroxyoxolan-2-yl]-3-carbamoyl-1lambda5-pyridin-1-ylium | C21H28N7O14P2 664.433 | ![]() |
YMDB00111 | D-Lactaldehyde 3946-09-6 | (2R)-2-hydroxypropanal | C3H6O2 74.0785 | ![]() |
YMDB00143 | NADH 58-68-4 | [({[(2R,3S,4R,5R)-5-(6-amino-9H-purin-9-yl)-3,4-dihydroxyoxolan-2-yl]methoxy}(hydroxy)phosphoryl)oxy]({[(2R,3S,4R,5R)-5-(3-carbamoyl-1,4-dihydropyridin-1-yl)-3,4-dihydroxyoxolan-2-yl]methoxy})phosphinic acid | C21H29N7O14P2 665.441 | ![]() |
YMDB00160 | Glutathione 70-18-8 | (2S)-2-amino-4-{[(1R)-1-[(carboxymethyl)carbamoyl]-2-sulfanylethyl]carbamoyl}butanoic acid | C10H17N3O6S 307.323 | ![]() |
YMDB00167 | Lactaldehyde 598-35-6 | (2S)-2-hydroxypropanal | C3H6O2 74.0785 | ![]() |
YMDB00170 | Pyruvaldehyde 78-98-8 | 2-oxopropanal | C3H4O2 72.0627 | ![]() |
YMDB00175 | Pyruvic acid 127-17-3 | 2-oxopropanoic acid | C3H4O3 88.0621 | ![]() |
YMDB00219 | Pyrophosphate 14000-31-8 | (phosphonooxy)phosphonic acid | H4O7P2 177.9751 | ![]() |
YMDB00235 | Oxalacetic acid 328-42-7 | 2-oxobutanedioic acid | C4H4O5 132.0716 | ![]() |
YMDB00246 | S-Lactoylglutathione 25138-66-3 | (2S)-2-amino-4-{[(1R)-1-[(carboxymethyl)carbamoyl]-2-{[(2R)-2-hydroxypropanoyl]sulfanyl}ethyl]carbamoyl}butanoic acid | C13H21N3O8S 379.386 | ![]() |
YMDB00247 | L-Lactic acid 79-33-4 | (2R)-2-hydroxypropanoic acid | C3H6O3 90.0779 | ![]() |
YMDB00276 | Phosphoenolpyruvic acid 138-08-9 | 2-(phosphonooxy)prop-2-enoic acid | C3H5O6P 168.042 | ![]() |
YMDB00280 | (S)-Malic acid 97-67-6 | (2S)-2-hydroxybutanedioic acid | C4H6O5 134.0874 | ![]() |
YMDB00287 | D-Lactic acid 10326-41-7 | (2S)-2-hydroxypropanoic acid | C3H6O3 90.0779 | ![]() |
YMDB00312 | Acetyl-CoA 72-89-9 | {[(2R,3S,4R,5R)-2-({[({[(3R)-3-[(2-{[2-(acetylsulfanyl)ethyl]carbamoyl}ethyl)carbamoyl]-3-hydroxy-2,2-dimethylpropoxy](hydroxy)phosphoryl}oxy)(hydroxy)phosphoryl]oxy}methyl)-5-(6-amino-9H-purin-9-yl)-4-hydroxyoxolan-3-yl]oxy}phosphonic acid | C23H38N7O17P3S 809.571 | ![]() |
YMDB00322 | Dihydroxyacetone phosphate 57-04-5 | (3-hydroxy-2-oxopropoxy)phosphonic acid | C3H7O6P 170.0578 | ![]() |
YMDB00365 | Alpha-Ketoisovaleric acid 759-05-7 | 3-methyl-2-oxobutanoic acid | C5H8O3 116.1152 | ![]() |
YMDB00381 | Thiamine pyrophosphate 154-87-0 | 3-[(4-amino-2-methylpyrimidin-5-yl)methyl]-5-(2-{[hydroxy(phosphonooxy)phosphoryl]oxy}ethyl)-4-methyl-1,3-thiazol-3-ium | C12H19N4O7P2S 425.314 | ![]() |
YMDB00385 | Formic acid 64-18-6 | formic acid | CH2O2 46.0254 | ![]() |
YMDB00427 | NADP 53-59-8 | 1-[(2R,3R,4S,5R)-5-[({[({[(2R,3R,4R,5R)-5-(6-amino-9H-purin-9-yl)-3-hydroxy-4-(phosphonooxy)oxolan-2-yl]methoxy}(hydroxy)phosphoryl)oxy](hydroxy)phosphoryl}oxy)methyl]-3,4-dihydroxyoxolan-2-yl]-3-carbamoyl-1lambda5-pyridin-1-ylium | C21H29N7O17P3 744.4129 | ![]() |
YMDB00529 | acetoacetyl-CoA 1420-36-6 | {[(2R,3S,4R,5R)-5-(6-amino-9H-purin-9-yl)-4-hydroxy-2-({[hydroxy({hydroxy[(3R)-3-hydroxy-2,2-dimethyl-3-{[2-({2-[(3-oxobutanoyl)sulfanyl]ethyl}carbamoyl)ethyl]carbamoyl}propoxy]phosphoryl}oxy)phosphoryl]oxy}methyl)oxolan-3-yl]oxy}phosphonic acid | C25H40N7O18P3S 851.607 | ![]() |
YMDB00533 | malonyl-CoA 524-14-1 | 3-[(2-{3-[(2R)-3-[({[({[(2R,3S,4R,5R)-5-(6-amino-9H-purin-9-yl)-4-hydroxy-3-(phosphonooxy)oxolan-2-yl]methoxy}(hydroxy)phosphoryl)oxy](hydroxy)phosphoryl}oxy)methyl]-2-hydroxy-3-methylbutanamido]propanamido}ethyl)sulfanyl]-3-oxopropanoic acid | C24H38N7O19P3S 853.58 | ![]() |
YMDB00690 | L-cysteinylglycine 70-18-8 | 2-[(2R)-2-amino-3-sulfanylpropanamido]acetic acid | C5H10N2O3S 178.21 | ![]() |
YMDB00862 | hydron 12408-02-5 | hydron | H 1.00794 | ![]() |
YMDB00880 | S-D-Lactoylglutathione 59-85-8 | 2-amino-3-({[(2R)-2-hydroxypropanoyl]sulfanyl}methyl)butanedioic acid | C8H13NO6S 251.257 | ![]() |
YMDB00883 | Ethanol 64-17-5 | ethanol | C2H6O 46.0684 | ![]() |
YMDB00890 | water 7732-18-5 | water | H2O 18.0153 | ![]() |
YMDB00907 | phosphate 14265-44-2 | phosphoric acid | O4P 94.9714 | ![]() |
YMDB00912 | Carbon dioxide 124-38-9 | methanedione | CO2 44.0095 | ![]() |
YMDB00914 | ADP 58-64-0 | [({[(2R,3S,4R,5R)-5-(6-amino-9H-purin-9-yl)-3,4-dihydroxyoxolan-2-yl]methoxy}(hydroxy)phosphoryl)oxy]phosphonic acid | C10H15N5O10P2 427.2011 | ![]() |
YMDB01003 | (S)-Lactate 79-33-4 | C3H5O3 89.07 | ![]() | |
YMDB01010 | acetate 71-50-1 | C2H3O2 59.044 | ![]() | |
YMDB01025 | formate 64-18-6 | CHO2 45.0174 | ![]() | |
YMDB01045 | (R)-lactic acid 10326-41-7 | C7H9O6 189.1428 | ![]() | |
YMDB01050 | phosphoenolpyruvate 138-08-9 | C3H4O6P 167.034 | ![]() | |
YMDB01053 | pyruvate 127-17-3 | C3H3O3 87.0541 | ![]() | |
YMDB01064 | (S)-malate(2-) | (2S)-2-hydroxybutanedioate | C4H4O5 132.0716 | ![]() |
YMDB01093 | thiamine(1+) diphosphate(1-) | 3-[(4-amino-2-methylpyrimidin-5-yl)methyl]-5-(2-{[(hydrogen phosphonatooxy)(hydroxy)phosphoryl]oxy}ethyl)-4-methyl-1,3-thiazol-3-ium | C12H18N4O7P2S 424.306 | ![]() |
YMDB01405 | propylene glycol 57-55-6 | propane-1,2-diol | C3H8O2 76.0944 | ![]() |
YMDB01487 | 2-Hydroxy-2-isopropylbutanedioic acid 49601-06-1 | (2S)-2-hydroxy-2-(propan-2-yl)butanedioic acid | C7H12O5 176.1672 | ![]() |
YMDB16118 | Hydrogen carbonate | carbonic acid | CHO3 61.0168 | ![]() |
YMDB16166 | 2-(a-Hydroxyethyl)thiamine diphosphate | 3-[(4-amino-2-methylpyrimidin-5-yl)methyl]-5-(2-{[hydroxy(phosphonooxy)phosphoryl]oxy}ethyl)-2-(1-hydroxyethyl)-4-methyl-1,3-thiazol-3-ium | C14H23N4O8P2S 469.367 | ![]() |
YMDB16193 | Acetyl adenylate | (acetyloxy)({[(2R,3S,4R,5R)-5-(6-amino-9H-purin-9-yl)-3,4-dihydroxyoxolan-2-yl]methoxy})phosphinic acid | C12H16N5O8P 389.2579 | ![]() |
YMDB16243 | Ferrocytochrome | 9-(2-carboxyethyl)-5-(2-carboxylatoethyl)-15-ethenyl-4,10,14,19,20-pentamethyl-21,22,23,24-tetraazapentacyclo[16.2.1.1³,⁶.1⁸,¹¹.1¹³,¹⁶]tetracosa-1,3,5,7,9,11(23),12,14,16(22),17,19-undecaen-21-ide iron | C33H32FeN4O4 604.489 | ![]() |
YMDB16246 | Pentane | pentane | C5H12 72.1488 | ![]() |
YMDB16255 | ferricytochrome c | 5-hydroxy-1,6,6,11,15-pentamethyl-14-[(5E)-6-methyl-7-{[3,4,5-trihydroxy-6-({[3,4,5-trihydroxy-6-(hydroxymethyl)oxan-2-yl]oxy}methyl)oxan-2-yl]oxy}hept-5-en-2-yl]tetracyclo[8.7.0.0²,⁷.0¹¹,¹⁵]heptadec-7-en-17-one | C42H68O13 780.993 | ![]() |
Pathway Proteins
Uniprot ID | Gene Name Locus | Name | Type | Metabolites |
---|---|---|---|---|
P09624 | LPD1 YFL018C | Dihydrolipoyl dehydrogenase, mitochondrial | Enzyme | |
P46367 | ALD4 YOR374W | Potassium-activated aldehyde dehydrogenase, mitochondrial | Enzyme | |
P16467 | PDC5 YLR134W | Pyruvate decarboxylase isozyme 2 | Enzyme |
|
P26263 | PDC6 YGR087C | Pyruvate decarboxylase isozyme 3 | Enzyme |
|
P54115 | ALD6 YPL061W | Magnesium-activated aldehyde dehydrogenase, cytosolic | Enzyme | |
P06169 | PDC1 YLR044C | Pyruvate decarboxylase isozyme 1 | Enzyme |
|
P30952 | MLS1 YNL117W | Malate synthase 1, glyoxysomal | Enzyme | |
P21826 | DAL7 YIR031C | Malate synthase 2, glyoxysomal | Enzyme | |
Q12122 | LYS21 YDL131W | Homocitrate synthase, mitochondrial | Enzyme | |
Q12166 | LEU9 YOR108W | 2-isopropylmalate synthase 2, mitochondrial | Enzyme | |
P41338 | ERG10 YPL028W | Acetyl-CoA acetyltransferase | Enzyme | |
P32316 | ACH1 YBL015W | Acetyl-CoA hydrolase | Enzyme | |
P06208 | LEU4 YNL104C | 2-isopropylmalate synthase | Enzyme | |
Q01574 | ACS1 YAL054C | Acetyl-coenzyme A synthetase 1 | Enzyme | |
P48570 | LYS20 YDL182W | Homocitrate synthase, cytosolic isozyme | Enzyme | |
P52910 | ACS2 YLR153C | Acetyl-coenzyme A synthetase 2 | Enzyme | |
P12695 | PDA2 YNL071W | Dihydrolipoyllysine-residue acetyltransferase component of pyruvate dehydrogenase complex, mitochondrial | Enzyme | |
P41921 | GLR1 YPL091W | Glutathione reductase | Enzyme | |
P32874 | HFA1 YMR207C | Acetyl-CoA carboxylase, mitochondrial | Enzyme | |
P11154 | PYC1 YGL062W | Pyruvate carboxylase 1 | Enzyme | |
Q00955 | FAS3 YNR016C | Acetyl-CoA carboxylase | Enzyme | |
P00549 | PYK1 YAL038W | Pyruvate kinase 1 | Enzyme | |
P52489 | PYK2 YOR347C | Pyruvate kinase 2 | Enzyme | |
Q12068 | GRE2 YOL151W | NADPH-dependent methylglyoxal reductase GRE2 | Enzyme | |
P10963 | PCK1 YKR097W | Phosphoenolpyruvate carboxykinase [ATP] | Enzyme | |
P32327 | PYC2 YBR218C | Pyruvate carboxylase 2 | Enzyme | |
P22133 | MDH2 YOL126C | Malate dehydrogenase, cytoplasmic | Enzyme | |
P36013 | MAE1 YKL029C | NAD-dependent malic enzyme, mitochondrial | Enzyme | |
P22281 | ALD1 | Aldehyde dehydrogenase 1, mitochondrial | Enzyme | |
P32419 | MDH3 YDL078C | Malate dehydrogenase, peroxisomal | Enzyme | |
P38715 | GRE3 YHR104W | NADPH-dependent aldose reductase GRE3 | Enzyme | |
P25377 | ADH7 YCR105W | NADP-dependent alcohol dehydrogenase 7 | Enzyme | |
Q04894 | ADH6 YMR318C | NADP-dependent alcohol dehydrogenase 6 | Enzyme | |
Q05584 | GLO2 YDR272W | Hydroxyacylglutathione hydrolase, cytoplasmic isozyme | Enzyme | |
P50107 | GLO1 YML004C | Lactoylglutathione lyase | Enzyme | |
Q12320 | GLO4 YOR040W | Hydroxyacylglutathione hydrolase, mitochondrial | Enzyme | |
P16387 | PDA1 YER178W | Pyruvate dehydrogenase E1 component subunit alpha, mitochondrial | Enzyme | |
P00175 | CYB2 YML054C | Cytochrome b2, mitochondrial | Enzyme | |
P32891 | DLD1 YDL174C | D-lactate dehydrogenase [cytochrome] 1, mitochondrial | Enzyme | |
P32473 | PDB1 YBR221C | Pyruvate dehydrogenase E1 component subunit beta, mitochondrial | Enzyme | |
P39976 | DLD3 YEL071W | D-lactate dehydrogenase [cytochrome] 3 | Enzyme | |
P46681 | DLD2 YDL178W | D-lactate dehydrogenase [cytochrome] 2, mitochondrial | Enzyme | |
P17505 | MDH1 | Malate dehydrogenase, mitochondrial | Enzyme | |
P16451 | PDX1 | Pyruvate dehydrogenase complex protein X component, mitochondrial |