Glycerol metabolism
| Source | ID | Pathway |
|---|---|---|
| PathWhiz | PW002407 |
Pathway Metabolites
| YMDB ID | Name CAS Number | IUPAC Name | Formula Weight | Structure |
|---|---|---|---|---|
| YMDB00018 | Dihydroxyacetone 96-26-4 | 1,3-dihydroxypropan-2-one | C3H6O3 90.0779 |  |
| YMDB00045 | Coenzyme A 85-61-0 | {[(2R,3S,4R,5R)-5-(6-amino-9H-purin-9-yl)-4-hydroxy-2-({[hydroxy({hydroxy[(3R)-3-hydroxy-2,2-dimethyl-3-({2-[(2-sulfanylethyl)carbamoyl]ethyl}carbamoyl)propoxy]phosphoryl}oxy)phosphoryl]oxy}methyl)oxolan-3-yl]oxy}phosphonic acid | C21H36N7O16P3S 767.534 |  |
| YMDB00073 | Glycerol 3-phosphate 17989-41-2 | [(2R)-2,3-dihydroxypropoxy]phosphonic acid | C3H9O6P 172.0737 |  |
| YMDB00109 | Adenosine triphosphate 56-65-5 | ({[({[(2R,3S,4R,5R)-5-(6-amino-9H-purin-9-yl)-3,4-dihydroxyoxolan-2-yl]methoxy}(hydroxy)phosphoryl)oxy](hydroxy)phosphoryl}oxy)phosphonic acid | C10H16N5O13P3 507.181 |  |
| YMDB00110 | NAD 53-84-9 | 1-[(2R,3R,4S,5R)-5-[({[({[(2R,3S,4R,5R)-5-(6-amino-9H-purin-9-yl)-3,4-dihydroxyoxolan-2-yl]methoxy}(hydroxy)phosphoryl)oxy](hydroxy)phosphoryl}oxy)methyl]-3,4-dihydroxyoxolan-2-yl]-3-carbamoyl-1lambda5-pyridin-1-ylium | C21H28N7O14P2 664.433 |  |
| YMDB00143 | NADH 58-68-4 | [({[(2R,3S,4R,5R)-5-(6-amino-9H-purin-9-yl)-3,4-dihydroxyoxolan-2-yl]methoxy}(hydroxy)phosphoryl)oxy]({[(2R,3S,4R,5R)-5-(3-carbamoyl-1,4-dihydropyridin-1-yl)-3,4-dihydroxyoxolan-2-yl]methoxy})phosphinic acid | C21H29N7O14P2 665.441 |  |
| YMDB00283 | Glycerol 56-81-5 | propane-1,2,3-triol | C3H8O3 92.0938 |  |
| YMDB00322 | Dihydroxyacetone phosphate 57-04-5 | (3-hydroxy-2-oxopropoxy)phosphonic acid | C3H7O6P 170.0578 |  |
| YMDB00341 | 3-Phosphoglyceric acid 820-11-1 | 2-hydroxy-3-(phosphonooxy)propanoic acid | C3H7O7P 186.0572 |  |
| YMDB00426 | NADPH 53-57-6 | {[(2R,3R,4R,5R)-2-(6-amino-9H-purin-9-yl)-5-[({[({[(2R,3S,4R,5R)-5-(3-carbamoyl-1,4-dihydropyridin-1-yl)-3,4-dihydroxyoxolan-2-yl]methoxy}(hydroxy)phosphoryl)oxy](hydroxy)phosphoryl}oxy)methyl]-4-hydroxyoxolan-3-yl]oxy}phosphonic acid | C21H30N7O17P3 745.4209 |  |
| YMDB00427 | NADP 53-59-8 | 1-[(2R,3R,4S,5R)-5-[({[({[(2R,3R,4R,5R)-5-(6-amino-9H-purin-9-yl)-3-hydroxy-4-(phosphonooxy)oxolan-2-yl]methoxy}(hydroxy)phosphoryl)oxy](hydroxy)phosphoryl}oxy)methyl]-3,4-dihydroxyoxolan-2-yl]-3-carbamoyl-1lambda5-pyridin-1-ylium | C21H29N7O17P3 744.4129 |  |
| YMDB00539 | oleoyl-CoA 1716-06-9 | {[(2R,3S,4R,5R)-5-(6-amino-9H-purin-9-yl)-4-hydroxy-2-({[hydroxy({hydroxy[(3R)-3-hydroxy-2,2-dimethyl-3-{[2-({2-[(9Z)-octadec-9-enoylsulfanyl]ethyl}carbamoyl)ethyl]carbamoyl}propoxy]phosphoryl}oxy)phosphoryl]oxy}methyl)oxolan-3-yl]oxy}phosphonic acid | C39H68N7O17P3S 1031.98 |  |
| YMDB00575 | D-glyceraldehyde 453-17-8 | (2R)-2,3-dihydroxypropanal | C3H6O3 90.0779 |  |
| YMDB00756 | 3-phospho-D-glyceric acid 820-11-1 | (2R)-2-hydroxy-3-(phosphonooxy)propanoic acid | C3H7O7P 186.0572 |  |
| YMDB00862 | hydron 12408-02-5 | hydron | H 1.00794 |  |
| YMDB00890 | water 7732-18-5 | water | H2O 18.0153 |  |
| YMDB00907 | phosphate 14265-44-2 | phosphoric acid | O4P 94.9714 |  |
| YMDB00914 | ADP 58-64-0 | [({[(2R,3S,4R,5R)-5-(6-amino-9H-purin-9-yl)-3,4-dihydroxyoxolan-2-yl]methoxy}(hydroxy)phosphoryl)oxy]phosphonic acid | C10H15N5O10P2 427.2011 |  |
| YMDB01162 | PA(16:0/16:1(9Z)) | [(2R)-2-[(9Z)-hexadec-9-enoyloxy]-3-(hexadecanoyloxy)propoxy]phosphonic acid |  | |
| YMDB01169 | PA(18:1(9Z)/18:1(9Z)) 14268-17-8 | [(2R)-2,3-bis[(9Z)-octadec-9-enoyloxy]propoxy]phosphonic acid | C39H73O8P 700.979 |  |
| YMDB02299 | Glyceric acid 473-81-4 | (2R)-2,3-dihydroxypropanoic acid | C3H6O4 106.0773 |  |
| YMDB02321 | Glyeric acid | (2R)-2,3-dihydroxypropanoic acid | C3H6O4 106.0773 |  |
| YMDB16128 | Glyceraldehyde | 2,3-dihydroxypropanal | C3H6O3 90.0779 |  |
| YMDB16273 | Glycerone phosphate | dilithium(1+) ion 1-hydroxy-3-(phosphonatooxy)propan-2-one | C3H5Li2O6P 181.924 |  |
| YMDB16302 | 1-oleyl-2-lyso-phosphatidate | (2R)-2-hydroxy-3-(phosphonatooxy)propyl (9Z)-octadec-9-enoate | C21H39O7P 434.511 |  |
| YMDB16303 | 1-oleoyl-2-lyso-glycerone phosphate | 2-oxo-3-(phosphonooxy)propyl (9Z)-octadec-9-enoate | C21H37O7P 432.495 |  |
Pathway Proteins
| Uniprot ID | Gene Name Locus | Name | Type | Metabolites |
|---|---|---|---|---|
| P43550 | DAK2 YFL053W | Dihydroxyacetone kinase 2 | Enzyme | |
| P14065 | GCY1 YOR120W | Protein GCY | Enzyme | |
| P54114 | ALD3 YMR169C | Aldehyde dehydrogenase [NAD(P)+] 2 | Enzyme | |
| P33333 | SLC1 YDL052C | Probable 1-acyl-sn-glycerol-3-phosphate acyltransferase | Enzyme | |
| P32784 | GPT1 YBL011W | Glycerol-3-phosphate O-acyltransferase 1 | Enzyme | |
| P36148 | GPT2 YKR067W | Glycerol-3-phosphate O-acyltransferase 2 | Enzyme | |
| Q08548 | ALE1 YOR175C | Lysophospholipid acyltransferase | Enzyme | |
| P40106 | HOR2 YER062C | (DL)-glycerol-3-phosphatase 2 | Enzyme | |
| P32190 | GUT1 YHL032C | Glycerol kinase | Enzyme | |
| P41277 | RHR2 YIL053W | (DL)-glycerol-3-phosphatase 1 | Enzyme | |
| P25377 | ADH7 YCR105W | NADP-dependent alcohol dehydrogenase 7 | Enzyme | |
| Q04894 | ADH6 YMR318C | NADP-dependent alcohol dehydrogenase 6 | Enzyme | |
| P40471 | AYR1 YIL124W | NADPH-dependent 1-acyldihydroxyacetone phosphate reductase | Enzyme | |
| Q12043 | TGL5 YOR081C | Lipase 5 | Enzyme |
|
| P36165 | TGL4 YKR089C | Lipase 4 | Enzyme |
|
| P42938 | TDA10 | Probable ATP-dependent kinase TDA10 | ||
| Q06508 | LOA1 | Lysophosphatidic acid:oleoyl-CoA acyltransferase 1 | Enzyme |