Lysolipid incorporation into ER PC(10:0/10:0)

SourceIDPathway
PathWhizPW002780 ThumbThumb?image type=greyscaleThumb?image type=simple

Pathway Metabolites

YMDB ID Name
CAS Number
IUPAC Name Formula
Weight
Structure
YMDB00073Glycerol 3-phosphate
17989-41-2
[(2R)-2,3-dihydroxypropoxy]phosphonic acidC3H9O6P
172.0737
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YMDB00090Citicoline
987-78-0
{2-[({[(2R,3S,4R,5R)-5-(4-amino-2-oxo-1,2-dihydropyrimidin-1-yl)-3,4-dihydroxyoxolan-2-yl]methoxy}(hydroxy)phosphoryl phosphono)oxy]ethyl}trimethylazaniumC14H26N4O11P2
488.324
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YMDB00109Adenosine triphosphate
56-65-5
({[({[(2R,3S,4R,5R)-5-(6-amino-9H-purin-9-yl)-3,4-dihydroxyoxolan-2-yl]methoxy}(hydroxy)phosphoryl)oxy](hydroxy)phosphoryl}oxy)phosphonic acidC10H16N5O13P3
507.181
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YMDB00191Phosphorylcholine
3616-04-4
[2-(trimethylazaniumyl)ethoxy]phosphonic acidC5H15NO4P
184.1507
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YMDB00198S-Adenosylhomocysteine
979-92-0
(2S)-2-amino-4-({[(2S,3S,4R,5R)-5-(6-amino-9H-purin-9-yl)-3,4-dihydroxyoxolan-2-yl]methyl}sulfanyl)butanoic acidC14H20N6O5S
384.411
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YMDB00219Pyrophosphate
14000-31-8
(phosphonooxy)phosphonic acidH4O7P2
177.9751
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YMDB00227Choline
62-49-7
(2-hydroxyethyl)trimethylazaniumC5H14NO
104.1708
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YMDB00279Cytidine triphosphate
65-47-4
({[({[(2R,3S,4R,5R)-5-(4-amino-2-oxo-1,2-dihydropyrimidin-1-yl)-3,4-dihydroxyoxolan-2-yl]methoxy}(hydroxy)phosphoryl)oxy](hydroxy)phosphoryl}oxy)phosphonic acidC9H16N3O14P3
483.1563
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YMDB00297S-Adenosylmethionine
29908-03-0
[(3S)-3-amino-3-carboxypropyl]({[(2S,3S,4R,5R)-5-(6-amino-9H-purin-9-yl)-3,4-dihydroxyoxolan-2-yl]methyl})methylsulfaniumC15H23N6O5S
399.445
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YMDB00309Glycerophosphocholine
28319-77-9
(2-{[(2S)-2,3-dihydroxypropyl phosphonato]oxy}ethyl)trimethylazaniumC8H20NO6P
257.2213
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YMDB00406Cytidine monophosphate
63-37-6
{[(2R,3S,4R,5R)-5-(4-amino-2-oxo-1,2-dihydropyrimidin-1-yl)-3,4-dihydroxyoxolan-2-yl]methoxy}phosphonic acidC9H14N3O8P
323.1965
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YMDB00438S-Adenosyl-L-methionine
29908-03-0
[(3S)-3-amino-3-carboxypropyl]({[(2S,3S,4R,5R)-5-(6-amino-9H-purin-9-yl)-3,4-dihydroxyoxolan-2-yl]methyl})methylsulfaniumC15H23N6O5S
399.445
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YMDB00694sn-Glycero-3-phosphocholine
563-24-6
[(2R)-2,3-dihydroxypropoxy][2-(trimethylazaniumyl)ethoxy]phosphinic acidC8H21NO6P
258.2292
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YMDB00862hydron
12408-02-5
hydronH
1.00794
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YMDB00890water
7732-18-5
waterH2O
18.0153
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YMDB00907phosphate
14265-44-2
phosphoric acidO4P
94.9714
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YMDB00914ADP
58-64-0
[({[(2R,3S,4R,5R)-5-(6-amino-9H-purin-9-yl)-3,4-dihydroxyoxolan-2-yl]methoxy}(hydroxy)phosphoryl)oxy]phosphonic acidC10H15N5O10P2
427.2011
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YMDB01162PA(16:0/16:1(9Z))[(2R)-2-[(9Z)-hexadec-9-enoyloxy]-3-(hexadecanoyloxy)propoxy]phosphonic acidThumb
YMDB12675DG(10:0/10:0/0:0)(2R)-1-(decanoyloxy)-3-hydroxypropan-2-yl decanoateC23H44O5
400.6
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YMDB13337Lyso-PI(10:0/0:0)[3-(decanoyloxy)-2-hydroxypropoxy][(2,3,4,5,6-pentahydroxycyclohexyl)oxy]phosphinic acidC19H37O12P
488.467
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YMDB13346Lyso-PI(0:0/10:0)[2-(decanoyloxy)-3-hydroxypropoxy][(2,3,4,5,6-pentahydroxycyclohexyl)oxy]phosphinic acidC19H37O12P
488.467
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YMDB13355Lyso-PS(10:0/0:0)2-azaniumyl-3-{[3-(decanoyloxy)-2-hydroxypropyl phosphono]oxy}propanoateC16H31NO9P
412.396
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YMDB13364Lyso-PS(0:0/10:0)2-azaniumyl-3-{[2-(decanoyloxy)-3-hydroxypropyl phosphono]oxy}propanoateC16H31NO9P
412.396
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YMDB13563PC(10:0/10:0)(2-{[(2R)-2,3-bis(decanoyloxy)propyl phosphono]oxy}ethyl)trimethylazaniumC28H56NO8P
565.729
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YMDB13690PE-NMe2(10:0/10:0)[2,3-bis(decanoyloxy)propoxy][2-(dimethylamino)ethoxy]phosphinic acidC27H54NO8P
551.702
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YMDB13852PE-NMe(10:0/10:0)[2,3-bis(decanoyloxy)propoxy][2-(methylamino)ethoxy]phosphinic acidC26H52NO8P
537.675
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YMDB14014PE(10:0/10:0)(2-aminoethoxy)[(2R)-2,3-bis(decanoyloxy)propoxy]phosphinic acidC25H50NO8P
523.648
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YMDB15297PI(10:0/10:0)[(2R)-2,3-bis(decanoyloxy)propoxy]({[(1s,3R)-2,3,4,5,6-pentahydroxycyclohexyl]oxy})phosphinic acidC29H55O13P
642.72
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YMDB15437PS(10:0/10:0)(2S)-2-amino-3-({[(2R)-2,3-bis(decanoyloxy)propoxy](hydroxy)phosphoryl}oxy)propanoic acidC26H50NO10P
567.657
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YMDB16163LysoPC(10:0)[(2R)-3-(decanoyloxy)-2-hydroxypropoxy][2-(trimethylazaniumyl)ethoxy]phosphinic acidC18H39NO7P
412.4785
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YMDB16278LysoPE(10:0/0:0)(2-aminoethoxy)[(2R)-3-(decanoyloxy)-2-hydroxypropoxy]phosphinic acidC15H32NO7P
369.3908
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Pathway Proteins

Uniprot ID Gene Name
Locus
Name Type Metabolites
P20485CKI1
YLR133W
Choline kinaseEnzyme
Q02979GDE1
YPL110C
Glycerophosphodiester phosphodiesterase GDE1Enzyme
P17898CPT1
YNL130C
Cholinephosphotransferase 1Enzyme
P13259PCT1
YGR202C
Choline-phosphate cytidylyltransferaseEnzyme
Q12674DNF3
YMR162C
Probable phospholipid-transporting ATPase DNF3Transporter
Q12675DNF2
YDR093W
Probable phospholipid-transporting ATPase DNF2Transporter
P32660DNF1
YER166W
Probable phospholipid-transporting ATPase DNF1Transporter
P05374PEM1
YGR157W
Phosphatidylethanolamine N-methyltransferaseEnzyme
P05375OPI3
YJR073C
Methylene-fatty-acyl-phospholipid synthaseEnzyme
Q04958NTE1
YML059C
Lysophospholipase NTE1Enzyme
P42838LEM3
Alkylphosphocholine resistance protein LEM3
A0A0D4EFH3
Ale1p
P53740CRF1
Uncharacterized protein YNR048WNot Available